Information for 8-TCTCTCTCTC (Motif 21)

A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C T G C G T A A T C G G T C A T A C G C G T A
p-value:1e-3
log p-value:-6.934e+00
Information Content per bp:1.908
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif89.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.1 +/- 13.1bp
Average Position of motif in Background44.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTCTCTCTC------
-ACCACTCTCGGTCAC
 A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCTCTC
ACTTTCACTTTC
 A C G T A C G T A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTCTC--
CTGTCTGTCACCT
 A C G T A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTCTCTCTC-
TCACTTTCACTTTCN
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTCTCTCTC--
TGTCTGDCACCT
 A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCTCTC
ACTTTCACTTTC
 A C G T A C G T A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------TCTCTCTCTC-
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCTCTC
AGTTTCAGTTTC
 A C G T A C G T A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTCTCTC--
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCTCTCTCTC------
-AGTATTCTCGGTTGC
 A C G T A T G C A C G T A T G C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C