Information for 10-CATGTCCCAGTGA (Motif 20)

A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A
Reverse Opposite:
A C G T A G T C C T G A A G T C A C G T A C T G C T A G A T C G G T C A A G T C G T C A A C G T A C T G
p-value:1e-3
log p-value:-7.808e+00
Information Content per bp:1.937
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 16.0bp
Average Position of motif in Background56.2 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CATGTCCCAGTGA-----
--TGACCCAGTGACCTAC
 A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CATGTCCCAGTGA---
NNNNTGCCAGTGATTG
 A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CATGTCCCAGTGA----
CAGGTCACCGTGACCTT
 A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATGTCCCAGTGA
---TGCCCAGNHW
 A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATGTCCCAGTGA--
NAGGTCACNNTGACC
 A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CATGTCCCAGTGA
TTATGTACTAATAA
 A C G T A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CATGTCCCAGTGA
-CTGTTCCTGG--
 A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CATGTCCCAGTGA-----
-TGTTCCCATTGTGTACT
 A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CATGTCCCAGTGA-
--GTCCCCAGGGGA
 A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CATGTCCCAGTGA-
NNNNTGACCCGGCGCG
 A C G T A C G T A G T C C G T A A C G T A C T G A C G T A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G