Information for 6-GGATGGCGST (Motif 19)

A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T
Reverse Opposite:
C G T A A T G C A T G C A C T G A G T C A G T C G T C A C G A T A G T C G T A C
p-value:1e-3
log p-value:-8.945e+00
Information Content per bp:1.831
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif52.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.7 +/- 24.9bp
Average Position of motif in Background50.1 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGATGGCGST-
TAATGGCGGNC
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGATGGCGST
-NTTGGCANN
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGATGGCGST
--TTGGCA--
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGATGGCGST
GGTTGGCAT-
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGATGGCGST--
----GGCVGTTR
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGCGST-----
NAGANTGGCGGGGNGNA
 A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGATGGCGST
TNNGGGCAG-
 A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGATGGCGST--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGCGST-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGATGGCGST
CAAGATGGCGGC
 A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T C G A T C G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C