Information for 7-GGAAAGGTAAAAC (Motif 16)

C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G C T A G C T C G T A A G T C A G T C A C G T A C G T A C G T A G T C A G T C
p-value:1e-6
log p-value:-1.453e+01
Information Content per bp:1.952
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 32.4bp
Average Position of motif in Background60.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGAAAGGTAAAAC
ANGNAAAGGTCA---
 A C G T A C G T C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGAAAGGTAAAAC-----
GGAAAGCGAAACCAAAAC
 C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGGTAAAAC-
TCTCAAAGGTCACGAG
 A C G T A C G T C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGGTAAAAC-
TCTCAAAGGTCACCTG
 A C G T A C G T C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAAAGGTAAAAC
-GAAAGTGAAAGT
 C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGAAAGGTAAAAC
-GAAASYGAAASY
 C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGAAAGGTAAAAC-
---CAGGTAAGTAT
 C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGAAAGGTAAAAC
TAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGAAAGGTAAAAC
-GAAACTGAAACT
 C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF7/MA0772.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGGTAAAAC
ACGAAAGCGAAAGT
 A C G T C T A G A C T G C G T A C G T A C G T A A C T G A C T G A C G T C T G A C T G A C G T A C G T A A G T C
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T