Information for 7-TGRTRMMAATATCMWY (Motif 11)

A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
Reverse Opposite:
C T A G C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C T G C A G T A G T C C G T A A G C T A G T C C G T A
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.832
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.2 +/- 13.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TGRTRMMAATATCMWY
-----AAGATATCCTT
 A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
A C G T A C G T A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGRTRMMAATATCMWY
-GCTAAAAATAGC---
 A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGRTRMMAATATCMWY
-NNTNNCAATATTAG-
 A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGRTRMMAATATCMWY
-NNTNNCAATATTAG-
 A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGRTRMMAATATCMWY
-TATGTAAATAT----
 A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGRTRMMAATATCMWY
-TATGTAAATAT----
 A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGRTRMMAATATCMWY
NAGATWNBNATCTNN--
 A C G T A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGRTRMMAATATCMWY
ATGCTAAAAATAGAA--
 A C G T A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGRTRMMAATATCMWY
-DCYAAAAATAGM---
 A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGRTRMMAATATCMWY--
-GACAGAGATATCAGTGT
 A C G T A C T G C T G A A C G T C T A G G T A C G T A C C G T A C G T A A C G T C G T A A C G T A G T C G T A C C G A T A G T C A C G T A C G T
A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T