Information for 9-GAGGAWRAGAAAG (Motif 18)

A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G
Reverse Opposite:
A G T C A G C T A C G T C G A T A G T C A C G T A G C T C G T A A C G T A G T C A G T C A G C T A G T C
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.846
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.0 +/- 25.3bp
Average Position of motif in Background43.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAGGAWRAGAAAG-
--GRAASTGAAAST
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAGGAWRAGAAAG-
--GGAAGTGAAAST
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G A C G T
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGGAWRAGAAAG
-CGGAAGTGAAAC
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGGAWRAGAAAG---
-AGAAAGTGAAAGTGA
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G A C G T A C G T A C G T
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGGAWRAGAAAG-
--GAAAGTGAAAGT
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G A C G T
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAGGAWRAGAAAG-
--GAAAGTGAAAGT
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G A C G T
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGGAWRAGAAAG---
-GGAAANTGAAACTNA
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G A C G T A C G T A C G T
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGGAWRAGAAAG
-TGGAACAGMA--
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGGAWRAGAAAG-
--GAAAMTGAAACT
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G A C G T
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGGAWRAGAAAG-
--GAAASYGAAASY
 A C T G C T G A A C T G C T A G C G T A G C A T C T G A C G T A A C T G C G T A C G T A C T G A A C T G A C G T
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T