Information for 5-KACMGTYTGTAYA (Motif 11)

A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T C G T A A G T C C G T A C T A G C G T A G T A C A C G T A C T G A C G T G T A C
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 16.6bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---KACMGTYTGTAYA
VAGRACAKWCTGTYC-
 A C G T A C G T A C G T A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---KACMGTYTGTAYA
VAGRACAKNCTGTBC-
 A C G T A C G T A C G T A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---KACMGTYTGTAYA
AAGAACATWHTGTTC-
 A C G T A C G T A C G T A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---KACMGTYTGTAYA
NAGNACANNNTGTNCT
 A C G T A C G T A C G T A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KACMGTYTGTAYA-
AGNACAGNCTGTTCTN
 A C G T A C G T A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:KACMGTYTGTAYA----
-NNNNTTTGTTTACNNT
 A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KACMGTYTGTAYA
VBSYGTCTGG---
 A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:KACMGTYTGTAYA
--CTGTCTGG---
 A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---KACMGTYTGTAYA-
GGGAACATTGTGTTCCC
 A C G T A C G T A C G T A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---KACMGTYTGTAYA-
NGGAACATNATGTACCC
 A C G T A C G T A C G T A C T G C G T A A G T C G T C A A C T G C G A T A G T C A C G T A C T G A C G T C G T A A G T C C G T A A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C