Information for 11-ACGCTGCCAA (Motif 6)

T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A
Reverse Opposite:
A G C T C A G T A C T G T C A G A T G C C G T A A T C G T G A C T C A G A C G T
p-value:1e-14
log p-value:-3.286e+01
Information Content per bp:1.554
Number of Target Sequences with motif152.0
Percentage of Target Sequences with motif17.14%
Number of Background Sequences with motif4099.5
Percentage of Background Sequences with motif8.88%
Average Position of motif in Targets50.6 +/- 25.4bp
Average Position of motif in Background51.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ACGCTGCCAA--
--GGTGCCAAGT
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.80
Offset:2
Orientation:forward strand
Alignment:ACGCTGCCAA-
--CGTGCCAAG
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.79
Offset:3
Orientation:forward strand
Alignment:ACGCTGCCAA-
---TTGCCAAG
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:ACGCTGCCAA
----TGCCAA
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ACGCTGCCAA
--GCTGTCAA
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACGCTGCCAA--
---ATGCCAACC
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACGCTGCCAA-
-VGCTGWCAVB
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ACGCTGCCAA
--CCTGTCAA
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ACGCTGCCAA
--RHTGWCAR
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ACGCTGCCAA--
----TGTCANYT
 T G C A A G T C A C T G T A G C G C A T A T C G A G T C T G A C G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T