Information for 20-GTACTCTATTGTT (Motif 22)

A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G A C G T C G T A A G T C
p-value:1e-7
log p-value:-1.625e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 19.3bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTACTCTATTGTT-----
-ANNTCTATTGTTCNNNA
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0073.1_Sox7_1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTACTCTATTGTT-------
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.71
Offset:5
Orientation:forward strand
Alignment:GTACTCTATTGTT-
-----CCATTGTTC
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GTACTCTATTGTT------
--AATCAATTGTTCCGCTA
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTACTCTATTGTT-----
-GTATCTATTGTTCTTTA
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTACTCTATTGTT----
-ANNTCCATTGTTCNNN
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTACTCTATTGTT-----
--NNTTTATTGTTCTNNN
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.68
Offset:7
Orientation:forward strand
Alignment:GTACTCTATTGTT-
-------ATTGTTA
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GTACTCTATTGTT------
---TTCAATTGTTCTAAAA
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GTACTCTATTGTT-
----NCCATTGTTC
 A C T G A C G T C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C