Information for 19-AGCGCAGGACACG (Motif 21)

C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
Reverse Opposite:
A G T C A T C G A G C T A C T G A C G T A T G C A G T C G A C T A T C G T A G C A T C G A G T C G A C T
p-value:1e-7
log p-value:-1.625e+01
Information Content per bp:1.539
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 28.8bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCGCAGGACACG
-GGGCGGGACC--
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCGCAGGACACG
--NACAGGAAAT-
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCGCAGGACACG
--NACAGGAAAT-
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGCGCAGGACACG
---ACAGGAAGTG
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCGCAGGACACG-
--NDCAGGAARTNN
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGCGCAGGACACG
----AAGGTCAC-
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCGCAGGACACG
--CACAGN-----
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCGCAGGACACG
---TRAGGTCA--
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGCGCAGGACACG
GGTCANYTGAGGWCA--
 A C G T A C G T A C G T A C G T C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGCGCAGGACACG
-----AGGTCA--
 C T G A T C A G T A G C A T C G T A G C C T G A T C A G T A C G T G C A T G A C T C G A T A G C T C A G
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T