Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-49 | -1.142e+02 | 0.0000 | 130.0 | 15.46% | 1479.4 | 3.12% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-49 | -1.137e+02 | 0.0000 | 149.0 | 17.72% | 1967.6 | 4.15% | motif file (matrix) |
svg |
3 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-40 | -9.390e+01 | 0.0000 | 124.0 | 14.74% | 1635.5 | 3.45% | motif file (matrix) |
svg |
4 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-36 | -8.340e+01 | 0.0000 | 50.0 | 5.95% | 230.5 | 0.49% | motif file (matrix) |
svg |
5 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-31 | -7.167e+01 | 0.0000 | 103.0 | 12.25% | 1461.9 | 3.09% | motif file (matrix) |
svg |
6 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-29 | -6.741e+01 | 0.0000 | 60.0 | 7.13% | 505.5 | 1.07% | motif file (matrix) |
svg |
7 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-27 | -6.230e+01 | 0.0000 | 65.0 | 7.73% | 664.6 | 1.40% | motif file (matrix) |
svg |
8 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-26 | -6.149e+01 | 0.0000 | 89.0 | 10.58% | 1268.5 | 2.68% | motif file (matrix) |
svg |
9 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-25 | -5.913e+01 | 0.0000 | 116.0 | 13.79% | 2118.1 | 4.47% | motif file (matrix) |
svg |
10 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-25 | -5.859e+01 | 0.0000 | 49.0 | 5.83% | 381.6 | 0.81% | motif file (matrix) |
svg |
11 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-23 | -5.513e+01 | 0.0000 | 75.0 | 8.92% | 1009.3 | 2.13% | motif file (matrix) |
svg |
12 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-23 | -5.416e+01 | 0.0000 | 100.0 | 11.89% | 1742.5 | 3.68% | motif file (matrix) |
svg |
13 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-22 | -5.080e+01 | 0.0000 | 79.0 | 9.39% | 1198.7 | 2.53% | motif file (matrix) |
svg |
14 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-21 | -5.049e+01 | 0.0000 | 81.0 | 9.63% | 1261.7 | 2.66% | motif file (matrix) |
svg |
15 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-18 | -4.209e+01 | 0.0000 | 55.0 | 6.54% | 715.6 | 1.51% | motif file (matrix) |
svg |
16 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-13 | -3.057e+01 | 0.0000 | 182.0 | 21.64% | 5876.5 | 12.40% | motif file (matrix) |
svg |
17 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-12 | -2.972e+01 | 0.0000 | 152.0 | 18.07% | 4625.1 | 9.76% | motif file (matrix) |
svg |
18 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-12 | -2.940e+01 | 0.0000 | 76.0 | 9.04% | 1661.1 | 3.51% | motif file (matrix) |
svg |
19 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-11 | -2.749e+01 | 0.0000 | 59.0 | 7.02% | 1150.2 | 2.43% | motif file (matrix) |
svg |
20 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-11 | -2.597e+01 | 0.0000 | 16.0 | 1.90% | 83.6 | 0.18% | motif file (matrix) |
svg |
21 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-10 | -2.402e+01 | 0.0000 | 67.0 | 7.97% | 1535.6 | 3.24% | motif file (matrix) |
svg |
22 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-10 | -2.383e+01 | 0.0000 | 73.0 | 8.68% | 1759.7 | 3.71% | motif file (matrix) |
svg |
23 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-9 | -2.290e+01 | 0.0000 | 61.0 | 7.25% | 1364.8 | 2.88% | motif file (matrix) |
svg |
24 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.284e+01 | 0.0000 | 51.0 | 6.06% | 1026.2 | 2.17% | motif file (matrix) |
svg |
25 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.271e+01 | 0.0000 | 54.0 | 6.42% | 1130.8 | 2.39% | motif file (matrix) |
svg |
26 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-9 | -2.165e+01 | 0.0000 | 55.0 | 6.54% | 1199.8 | 2.53% | motif file (matrix) |
svg |
27 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-8 | -1.846e+01 | 0.0000 | 54.0 | 6.42% | 1280.4 | 2.70% | motif file (matrix) |
svg |
28 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.728e+01 | 0.0000 | 86.0 | 10.23% | 2589.4 | 5.47% | motif file (matrix) |
svg |
29 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-5 | -1.317e+01 | 0.0000 | 39.0 | 4.64% | 947.0 | 2.00% | motif file (matrix) |
svg |
30 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-4 | -1.141e+01 | 0.0001 | 35.0 | 4.16% | 872.0 | 1.84% | motif file (matrix) |
svg |
31 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.107e+01 | 0.0002 | 32.0 | 3.80% | 776.4 | 1.64% | motif file (matrix) |
svg |
32 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.032e+01 | 0.0004 | 45.0 | 5.35% | 1314.9 | 2.78% | motif file (matrix) |
svg |
33 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -9.175e+00 | 0.0011 | 9.0 | 1.07% | 101.4 | 0.21% | motif file (matrix) |
svg |
34 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -9.002e+00 | 0.0013 | 200.0 | 23.78% | 8837.9 | 18.65% | motif file (matrix) |
svg |
35 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.520e+00 | 0.0021 | 12.0 | 1.43% | 191.0 | 0.40% | motif file (matrix) |
svg |
36 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.865e+00 | 0.0039 | 41.0 | 4.88% | 1299.5 | 2.74% | motif file (matrix) |
svg |
37 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-3 | -7.842e+00 | 0.0039 | 121.0 | 14.39% | 5027.4 | 10.61% | motif file (matrix) |
svg |
38 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-3 | -7.505e+00 | 0.0053 | 27.0 | 3.21% | 748.8 | 1.58% | motif file (matrix) |
svg |
39 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -6.950e+00 | 0.0089 | 6.0 | 0.71% | 62.8 | 0.13% | motif file (matrix) |
svg |
40 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -6.948e+00 | 0.0089 | 20.0 | 2.38% | 507.0 | 1.07% | motif file (matrix) |
svg |
41 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -6.923e+00 | 0.0089 | 58.0 | 6.90% | 2124.0 | 4.48% | motif file (matrix) |
svg |
42 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.818e+00 | 0.0095 | 71.0 | 8.44% | 2738.4 | 5.78% | motif file (matrix) |
svg |
43 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.324e+00 | 0.0152 | 17.0 | 2.02% | 421.2 | 0.89% | motif file (matrix) |
svg |
44 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.876e+00 | 0.0232 | 80.0 | 9.51% | 3279.2 | 6.92% | motif file (matrix) |
svg |
45 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.591e+00 | 0.0302 | 17.0 | 2.02% | 453.1 | 0.96% | motif file (matrix) |
svg |
46 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.555e+00 | 0.0306 | 80.0 | 9.51% | 3321.3 | 7.01% | motif file (matrix) |
svg |
47 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.491e+00 | 0.0319 | 38.0 | 4.52% | 1346.9 | 2.84% | motif file (matrix) |
svg |
48 |
| GFX(?)/Promoter/Homer | 1e-2 | -5.455e+00 | 0.0324 | 3.0 | 0.36% | 18.0 | 0.04% | motif file (matrix) |
svg |
49 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.368e+00 | 0.0346 | 34.0 | 4.04% | 1178.1 | 2.49% | motif file (matrix) |
svg |
50 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.166e+00 | 0.0415 | 62.0 | 7.37% | 2498.7 | 5.27% | motif file (matrix) |
svg |
51 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.067e+00 | 0.0450 | 233.0 | 27.71% | 11335.7 | 23.93% | motif file (matrix) |
svg |
52 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-2 | -5.020e+00 | 0.0462 | 11.0 | 1.31% | 254.2 | 0.54% | motif file (matrix) |
svg |
53 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.006e+00 | 0.0462 | 92.0 | 10.94% | 3994.5 | 8.43% | motif file (matrix) |
svg |
54 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -4.909e+00 | 0.0498 | 50.0 | 5.95% | 1956.2 | 4.13% | motif file (matrix) |
svg |
55 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -4.853e+00 | 0.0517 | 8.0 | 0.95% | 157.9 | 0.33% | motif file (matrix) |
svg |
56 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.680e+00 | 0.0603 | 164.0 | 19.50% | 7760.3 | 16.38% | motif file (matrix) |
svg |
57 |
| Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-2 | -4.609e+00 | 0.0636 | 169.0 | 20.10% | 8039.9 | 16.97% | motif file (matrix) |
svg |