Information for 5-TTCAGGACGTCTV (Motif 5)

A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
Reverse Opposite:
A G T C C G T A C T A G C G T A A T G C A C T G A G C T A T G C A T G C A C G T A C T G C G T A C G T A
p-value:1e-15
log p-value:-3.678e+01
Information Content per bp:1.865
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.6 +/- 21.0bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTCAGGACGTCTV
NNNTTTTACGACNTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTCAGGACGTCTV
ANNTTTTACGACNTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A A C G T

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCAGGACGTCTV-
--CAAGACGCCTTA
 A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G A C G T
A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTCAGGACGTCTV
NNGTTTTACGACTTTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTCAGGACGTCTV
ANNATTTTACGACNTNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTCAGGACGTCTV
NNNATTTTACGACNNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTCAGGACGTCTV---
TNAACGACGTCGNCCA
 A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGGACGTCTV
NTTTTACGAC-----
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGGACGTCTV
NTTTTACGAC-----
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGGACGTCTV
NTTTTACGACC----
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T C G C T G A A G T C A T C G C G A T A G T C A C G T T A C G
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T A C G T A C G T