p-value: | 1e-18 |
log p-value: | -4.307e+01 |
Information Content per bp: | 1.686 |
Number of Target Sequences with motif | 163.0 |
Percentage of Target Sequences with motif | 19.38% |
Number of Background Sequences with motif | 4385.4 |
Percentage of Background Sequences with motif | 9.26% |
Average Position of motif in Targets | 49.3 +/- 25.7bp |
Average Position of motif in Background | 49.2 +/- 32.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.93 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YCTGCCAAGC -TTGCCAAG- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 2 |
Score: | 0.91 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | YCTGCCAAGC GGTGCCAAGT |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.90 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | YCTGCCAAGC CGTGCCAAG- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.88 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | YCTGCCAAGC --TGCCAA-- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 5 |
Score: | 0.80 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YCTGCCAAGC -ATGCCAACC |
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HIC2/MA0738.1/Jaspar
Match Rank: | 6 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YCTGCCAAGC -ATGCCCACC |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 7 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --YCTGCCAAGC---- ACTATGCCAACCTACC |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 8 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | YCTGCCAAGC GCTGTCAA-- |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 9 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | YCTGCCAAGC --TGTCANYT |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 10 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | YCTGCCAAGC RHTGWCAR-- |
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