Information for 14-AGGAGCGTCT (Motif 18)

T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A T G C A T C G A G T C C G A T A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.858
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif38.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets56.5 +/- 17.5bp
Average Position of motif in Background53.4 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGAGCGTCT
CGGAGC----
 T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGAGCGTCT------
-GGNGCGNCTGTTNNN
 T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGGAGCGTCT
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A C G T T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGAGCGTCT--
--VBSYGTCTGG
 T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGAGCGTCT
--CAGCC---
 T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGCGTCT--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGGAGCGTCT--
----CTGTCTGG
 T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGAGCGTCT--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGCGTCT----
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGCGTCT---
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T A C G T A C G T T C G A C T A G A C T G C G T A A C T G A T G C T A C G A C G T A G T C A C G T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T