Information for 12-GATRAYCAGGACA (Motif 12)

A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T G T A C A G T C A C G T A C T G T C A G A C G T A G T C C G T A C G A T A G T C
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 21.9bp
Average Position of motif in Background62.2 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GATRAYCAGGACA
-----TRAGGTCA
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GATRAYCAGGACA
TAATGATGATCACTA--
 A C G T A C G T A C G T A C G T A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GATRAYCAGGACA-
----ANCAGGATGT
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GATRAYCAGGACA-
----NACAGGAAAT
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GATRAYCAGGACA-
TATAAGTAGGTCAA
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GATRAYCAGGACA-
----NACAGGAAAT
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GATRAYCAGGACA
-------AGGTCA
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GATRAYCAGGACA
---AAYTAGGTCA
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GATRAYCAGGACA-
------AAGGTCAC
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GATRAYCAGGACA--
-----CAAGGHCANV
 A C T G C G T A G C A T C T A G G T C A A G T C G T A C C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G