Information for 6-AACAGAGCAT (Motif 17)

C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
Reverse Opposite:
G C T A C G A T A C T G A G T C C G A T A G T C A C G T A C T G A C G T A G C T
p-value:1e-9
log p-value:-2.142e+01
Information Content per bp:1.836
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif156.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets51.3 +/- 23.9bp
Average Position of motif in Background52.1 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAGCAT--
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAGCAT--
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGCAT
GGAACAAAGR--
 A C G T A C G T C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------AACAGAGCAT
AACACCAAAACAAAGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AACAGAGCAT
GTAAACAG-----
 A C G T A C G T A C G T C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGCAT
VRRACAAWGG--
 A C G T A C G T C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------AACAGAGCAT
CAAAAGTAAACAAAG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AACAGAGCAT
-ACAAAG---
 C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACAGAGCAT
CACAGN----
 C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGCAT
AAAACAAAGG--
 A C G T A C G T C T G A C G T A A G T C C G T A C T A G C G T A T C A G G T A C C G T A C G A T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T