Information for 10-CTGTGAAAGGTGA (Motif 16)

A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A
Reverse Opposite:
A C G T A G T C C G T A G A T C A G T C A G C T A C G T A C G T A T G C C G T A A G T C C T G A A T C G
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.786
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.0 +/- 30.1bp
Average Position of motif in Background53.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTGTGAAAGGTGA--
---TGACAGGTGTCA
 A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

PH0140.1_Pknox1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAAGGTGA--
GGATTGACAGGTCNTT
 A C G T A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PKNOX1/MA0782.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTGTGAAAGGTGA--
---TGACAGGTGTCA
 A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
A C G T A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAAGGTGA--
NTATTGACAGGTNNTN
 A C G T A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAAGGTGA--
NNATTGACAGGTGCTT
 A C G T A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAAGGTGA--
GTATTGACAGGTNNTT
 A C G T A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAAAGGTGA--
NTATTGACAGCTNNTT
 A C G T A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

TGIF2/MA0797.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTGTGAAAGGTGA--
---TGACAGCTGTCA
 A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAAAGGTGA
GAGGTCAAAGGTCA
 A C G T A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGTGAAAGGTGA--
GATATTGACAGCTGCGT
 A C G T A C G T A T G C A G C T C T A G A C G T T A C G C G T A G T C A C T G A C T A G C A T G A C G T A C T G T G C A A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T