Information for 4-ADTTTTCACATGT (Motif 7)

C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T A C T G A C G T A T C G C G T A C G T A C G T A G T C A G C A T A C G T
p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 27.0bp
Average Position of motif in Background36.3 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ADTTTTCACATGT-----
-NNTTTTACATGTANNNT
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ADTTTTCACATGT-----
-ANTNNTACATGTANNTN
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ADTTTTCACATGT-----
-ANTATTACATGTANNNN
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ADTTTTCACATGT-----
-ANTTNTACATGTANTTN
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ADTTTTCACATGT-----
-NNTATTACATGTANNNT
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ADTTTTCACATGT-----
-ANTNTTACATGTATNTA
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ADTTTTCACATGT
NNTTTTTCTTATNT
 A C G T C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ADTTTTCACATGT----
-NTATTGACAGGTNNTN
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ADTTTTCACATGT
CGGTTTCAAA---
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ADTTTTCACATGT----
-GTATTGACAGGTNNTT
 C G T A C G T A A C G T C G A T A C G T A C G T A T G C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T