Information for 2-TAAGGCATCTAGA (Motif 4)

A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
Reverse Opposite:
C A G T A G T C A C G T C G T A A C T G C G T A A C G T A C T G A G T C T G A C A G C T A C G T C T G A
p-value:1e-11
log p-value:-2.657e+01
Information Content per bp:1.770
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 25.8bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAAGGCATCTAGA
TAAGGCGTCTTG-
 A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAAGGCATCTAGA
-AAGGCAAGTGT-
 A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TAAGGCATCTAGA-------
---NNGATCTAGAACCTNNN
 A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PH0088.1_Isl2/Jaspar

Match Rank:4
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TAAGGCATCTAGA
AAATTAATTGATTTNG-
 A C G T A C G T A C G T A C G T A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TAAGGCATCTAGA
CCWGGAATGY---
 A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TAAGGCATCTAGA
-NTGGAATGTG--
 A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TAAGGCATCTAGA
TAATTTAATTA--
 A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TAAGGCATCTAGA
-NTGGAATGTN--
 A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----TAAGGCATCTAGA
ATGCATWATGCATRW---
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TAAGGCATCTAGA
ATATGCAAATNNN
 A G C T C G T A C T G A A C T G C T A G G T A C C G T A C G A T G T A C A C G T G T C A C T A G G C T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A