Information for 12-ATAGCAGACAGCC (Motif 21)

C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C T G A C G T A G T C A G C T A C T G A G T C A C G T C T G A C G A T
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 19.1bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ATAGCAGACAGCC
---CCAGACRSVB
 C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ATAGCAGACAGCC
---CCAGACAG--
 C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATAGCAGACAGCC--
-TGGCAGNCTGCCAG
 C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATAGCAGACAGCC--
CAAATCCAGACATCACA
 A C G T A C G T C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ATAGCAGACAGCC
------CACAGN-
 C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATAGCAGACAGCC
---BCAGACWA--
 C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATAGCAGACAGCC
---VBTGWCAGCB
 C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------ATAGCAGACAGCC
AGAGRRACAGCWGAC----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATAGCAGACAGCC--
--AGGTGNCAGACAG
 C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATAGCAGACAGCC-----
---AGCAACAGCCGCACC
 C G T A A G C T C G T A A C T G A G T C C T G A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C