Information for 8-GCTTCAGAGAAAGVAC (Motif 9)

T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
Reverse Opposite:
A T C G A C G T A C T G A G T C A C G T A C G T A C G T A T G C A C G T A G T C A C G T A C T G C G T A C G T A A C T G A G T C
p-value:1e-13
log p-value:-3.095e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 26.9bp
Average Position of motif in Background34.1 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCTTCAGAGAAAGVAC-
-AAACAGACAAAGGAAT
 T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTTCAGAGAAAGVAC
NTTTCTNAGAAA----
 T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTTCAGAGAAAGVAC
-TTTCCAGGAAATGG-
 T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCAGAGAAAGVAC
TGAATTCCTAGAAAGCA-
 A C G T A C G T T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTTCAGAGAAAGVAC
--GAAAGTGAAAGT--
 T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTTCAGAGAAAGVAC
--TTCTTGGAAAN---
 T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTTCAGAGAAAGVAC
-CTTCTGGGAAA----
 T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCAGAGAAAGVAC
NNNATTCCTCGAAAGN--
 A C G T A C G T T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTTCAGAGAAAGVAC
ATTTCCNGGAAATN--
 T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTTCAGAGAAAGVAC---
-----GGAGAAAGGTGCGA
 T C A G G T A C A C G T C G A T A G T C C G T A A C T G C G T A A T C G C G T A C G T A C G T A T C A G T A G C C G T A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A