Information for 19-GAAACTTCATCTC (Motif 19)

A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C
Reverse Opposite:
A C T G G T C A A C T G C T G A A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C G T A G T C
p-value:1e-7
log p-value:-1.710e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 17.4bp
Average Position of motif in Background61.0 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAAACTTCATCTC
--CACTTCCTCT-
 A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C
A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAAACTTCATCTC
---ACGTCATC--
 A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C
A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAAACTTCATCTC
AATGCCACGTCATC--
 A C G T A C G T A C G T A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAACTTCATCTC----
NANANTTAATCCCNNNN
 A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAACTTCATCTC
GWAAYHTGAKMC-
 A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAAACTTCATCTC
GWAAYHTGABMC-
 A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAAACTTCATCTC--
-NNACTTCCTCTTNN
 A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C A C G T A C G T
A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

CREB3/MA0638.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAAACTTCATCTC
GTGCCACGTCATCA-
 A C G T A C G T A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAACTTCATCTC----
GATAATTAATCCCTCTT
 A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAAACTTCATCTC-
--CACTTCCYCTTT
 A C T G C G T A G T C A G T C A A G T C A C G T A C G T A G T C C G T A A G C T A G T C A C G T A G T C A C G T
A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T