Information for 9-GCTATTTTTA (Motif 16)

A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A
Reverse Opposite:
A G C T C G T A C G T A G T C A C G T A C G T A C G A T C G T A C T A G G T A C
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.840
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif90.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets43.0 +/- 28.6bp
Average Position of motif in Background49.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA--
KCTATTTTTRGH
 A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GCTATTTTTA--
GCTATTTTTAGC
 A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GCTATTTTTA----
TTCTATTTTTAGNNN
 A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA--
GCTATTTATAGC
 A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GCTATTTTTA--
GCTATTTTTGGM
 A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA--
TCTATTTTTAGA
 A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GCTATTTTTA--
TCTATTTATAGN
 A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GCTATTTTTA-
-CTATTTTTGG
 A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCTATTTTTA-
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTATTTTTA-
-CCATATATGG
 A C T G A G T C A C G T C G T A C G A T A C G T A C G T A C G T G C A T T C G A A C G T
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G