Information for 9-GTGTCTGTTGTCA (Motif 5)

A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C C G T A C G T A A G T C G T C A A C T G G T C A A G T C C G T A A G T C
p-value:1e-11
log p-value:-2.740e+01
Information Content per bp:1.894
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 26.9bp
Average Position of motif in Background89.5 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTGTCTGTTGTCA
-TGACAGGTGTCA
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

PKNOX2/MA0783.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGTCTGTTGTCA
-TGACAGGTGTCA
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

TGIF1/MA0796.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGTCTGTTGTCA
-TGACAGCTGTCA
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A

TGIF2/MA0797.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGTCTGTTGTCA
-TGACAGCTGTCA
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTGTCTGTTGTCA
--GGCVGTTR---
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGTCTGTTGTCA
-TGTCGGTT----
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGTCTGTTGTCA
-TGGCAGTTGG--
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGTCTGTTGTCA
GGNGCGNCTGTTNNN-
 A C G T A C G T A C G T A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGTCTGTTGTCA
-TGGCAGTTGN--
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGTCTGTTGTCA
-BRRCVGTTDN--
 A C T G A C G T A C T G C A G T A G T C A C G T A C T G A C G T A C G T C T A G A C G T T G A C C G T A
A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T