Information for 11-TTATTATARA (Motif 29)

A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A
Reverse Opposite:
A C G T G A T C C A G T T C G A A C G T C T G A C G T A G C A T C T G A C G T A
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.743
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif45.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets44.8 +/- 35.1bp
Average Position of motif in Background47.5 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TTATTATARA---
CCGTATTATAAACAA
 A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----TTATTATARA-
TTTAATTATAATTAAG
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----TTATTATARA-
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TTATTATARA-
GCTAATTATAATTATC
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TTATTATARA-
TAAGATTATAATACGG
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

LMX1B/MA0703.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTATTATARA
TTAATTAN---
 A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A
A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A A C G T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTATTATARA
GGTAATTAGC--
 A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTATTATARA
AGTAATTAAC--
 A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTATTATARA
TTTAATTANN--
 A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A
C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTATTATARA
TTTTATTGC---
 A C G T A C G T A C G T G A C T C G T A C G A T G A C T C G T A A G C T G T C A C T A G G T C A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T