Information for 16-ACTGTATTGTGTG (Motif 21)

C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G
Reverse Opposite:
A G T C C G T A A G T C C G T A A G T C C G T A C T G A A C G T C G T A A G T C C G T A A C T G A C G T
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 28.3bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACTGTATTGTGTG--
NNNCCATTGTGTNAN
 C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACTGTATTGTGTG-----
--NNNNTTGTGTGCTTNN
 C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTGTATTGTGTG
--CTCATTGTC--
 C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACTGTATTGTGTG--
CAATGCATTGTGGGTA
 A C G T C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ACTGTATTGTGTG-
-----ATTGTTTAN
 C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACTGTATTGTGTG
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACTGTATTGTGTG-----
--NNGCGTGTGTGCNGCN
 C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACTGTATTGTGTG----
AATCAATTGTTCCGCTA
 C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACTGTATTGTGTG-----
---CCATTGTATGCAAAT
 C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACTGTATTGTGTG
-----ATTGTTA-
 C G T A A G T C C G A T A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C T G C G A T C T A G
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T