Information for 14-GCAATGTTCCTTC (Motif 16)

A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
Reverse Opposite:
C T A G G T C A G T C A A C T G A C T G C G T A G T C A A G T C G T C A C A G T G C A T C T A G A T G C
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.769
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 24.7bp
Average Position of motif in Background49.9 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCAATGTTCCTTC
---CTGTTCCTGG
 A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCAATGTTCCTTC
-GAATGTTTGTTT
 A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAATGTTCCTTC
YCTTTGTTCC---
 A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCAATGTTCCTTC
ANNTCCATTGTTCNNN-
 A C G T A C G T A C G T A C G T A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GCAATGTTCCTTC-
--------GCTTCC
 A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAATGTTCCTTC
-TATTGTTTATT-
 A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAATGTTCCTTC
NCCATTGTTC----
 A C G T A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCAATGTTCCTTC-
NCNTTTGTTATTTNN
 A C G T A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCAATGTTCCTTC
CCWTTGTYYB---
 A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAATGTTCCTTC
CCATTGTTNY---
 A T C G G A T C C G T A G C T A A C G T A C T G A C G T A C G T T A G C G T A C A C G T A C G T A G T C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T