Information for 11-AACCCHATTTAAVADG (Motif 15)

C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
Reverse Opposite:
A T G C G A C T G C A T A C G T A C G T A C G T C G T A G T C A C T G A C G A T C A T G A C T G A C T G A C T G A C G T A C G T
p-value:1e-9
log p-value:-2.214e+01
Information Content per bp:1.763
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.8 +/- 26.4bp
Average Position of motif in Background73.3 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACCCHATTTAAVADG
CTTAACCACTTAAGGAT
 A C G T C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AACCCHATTTAAVADG
---ACCACTTAA----
 C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AACCCHATTTAAVADG
CATAACCACTTAACAAC
 A C G T C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AACCCHATTTAAVADG
CAAAACCAATTAATTT-
 A C G T C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AACCCHATTTAAVADG
-----NATTCAAAT--
 C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AACCCHATTTAAVADG
AAAAACCAATTAAGAA-
 A C G T C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AACCCHATTTAAVADG
---ACCACTTAA----
 C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AACCCHATTTAAVADG
AACCCAATAAAATTCG
 C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AACCCHATTTAAVADG
NAAACCACAG--------
 A C G T A C G T C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AACCCHATTTAAVADG
----CTAATTAA----
 C G T A C G T A A G T C G T A C G T A C G A T C C G T A A G C T A C G T A C G T C G T A C G T A T C G A C G T A C G T A T A C G
A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T