Information for 13-AAATCTAGCS (Motif 11)

G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G
Reverse Opposite:
A T G C C T A G G T A C C G A T C G T A A T C G C G T A C A G T A C G T A C G T
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.704
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif318.0
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets52.6 +/- 25.6bp
Average Position of motif in Background49.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAATCTAGCS--
-AATGTATCAAT
 G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAATCTAGCS---
-ATTCTCGCGAGA
 G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T A C G T A C G T
A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAATCTAGCS-------
--CTCTCGCGAGATCTG
 G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AAATCTAGCS-
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

Pax6/MA0069.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAATCTAGCS----
AANTCATGCGTGAA
 G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T A C G T A C G T A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AAATCTAGCS-
ANTATTACATGTANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

ZBED1/MA0749.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAATCTAGCS----
-TATGTCGCGATAG
 G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAATCTAGCS-
CCACCTGTTGCAT
 A C G T A C G T G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAATCTAGCS-
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AAATCTAGCS-
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A T G C A G T C A C G A T A T G C G C A T G C T A A C T G A G T C A T C G A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A