Information for 5-CCTTTCAYTMAGT (Motif 5)

A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T A C T G C T G A C T G A C A G T A C T G T G C A C G T A C G T A A C T G A C T G
p-value:1e-13
log p-value:-3.123e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 31.8bp
Average Position of motif in Background43.0 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTTTCAYTMAGT
GSCTGTCACTCA--
 A C G T A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTTTCAYTMAGT
NCTGTCAATCAN-
 A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTCAYTMAGT
NNGCACCTTTCTCC----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTTTCAYTMAGT
ACTTTCACTTTC-
 A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTCAYTMAGT--
NNCATTCATTCATNNN
 A C G T A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTTTCAYTMAGT
SCTGTCAVTCAV-
 A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTCAYTMAGT
TCACTTTCACTTTCN
 A C G T A C G T A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTCAYTMAGT
TGACCTTTGCCCTAN-
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTTTCAYTMAGT
TGACCTTTGCCCCA--
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTTTCAYTMAGT
TGACCTTTNCNT----
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A G T C G T C A A G C T A G C T G T A C C G T A A T C G A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T A C G T