Information for 4-TCCTCACAGGGGC (Motif 6)

A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C G T A C G T A C G T A C C G A T A T C G G A C T A C T G G T C A A C T G A C T G T C G A
p-value:1e-8
log p-value:-1.870e+01
Information Content per bp:1.755
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.46%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.8 +/- 13.7bp
Average Position of motif in Background49.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCACAGGGGC
TTCCTCT-------
 A C G T A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TCCTCACAGGGGC
NNAYTTCCTGHN------
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCCTCACAGGGGC-------
GCCASCAGGGGGCGCYVNNG
 A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCACAGGGGC
TGWCCTCARNTGACC
 A C G T A C G T A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCCTCACAGGGGC
TCCCCA-------
 A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TCCTCACAGGGGC
NRYTTCCGGH-------
 A C G T A C G T A C G T A C G T A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C
A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:TCCTCACAGGGGC---
-------NTTGGCANN
 A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TCCTCACAGGGGC
-CCATATATGGNA
 A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TCCTCACAGGGGC------
---NNNNTTGGGCACNNCN
 A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TCCTCACAGGGGC-
----CCGATTGGCT
 A G C T A G T C A G T C A C G T T A G C C G T A A T G C G C T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T