Information for 3-GGCAGCTGCCGHTGGD (Motif 3)

A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
Reverse Opposite:
G A T C T G A C A T G C G T C A C A T G G A T C A C T G A C T G G T A C T C G A A C T G A G T C A C G T A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.745
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 23.4bp
Average Position of motif in Background38.8 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGCCGHTGGD
AGCAGCTGCTNN----
 A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGCAGCTGCCGHTGGD
CTCAGCAGCTGCTACTG--
 A C G T A C G T A C G T A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGCCGHTGGD
GACAGCTGCAG-----
 A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGCCGHTGGD
AGCAGCTGCT------
 A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGCCGHTGGD
CGCAGCTGCG------
 A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGCCGHTGGD
TGCAGCTGTCCCT---
 A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCAGCTGCCGHTGGD
-NCAGCTGCTG-----
 A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGCCGHTGGD
AACAGCTGCAG-----
 A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAGCTGCCGHTGGD
NNACAGCTGC-------
 A C G T A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGCTGCCGHTGGD
TGGCACGTGCCA-----
 A C G T A C T G A C T G G T A C T G C A A C T G A G T C A G C T A C T G A G T C A G T C C T A G G A T C C A G T A T C G A C T G C T A G
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T