Information for 16-GCCATCTACCTTC (Motif 25)

C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C T G A C G T C T G A A C T G C G T A A C G T A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.956
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 34.2bp
Average Position of motif in Background37.6 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCATCTACCTTC
GCCATCTGTT---
 C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTACCTTC
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCATCTACCTTC
GGCCATTAAC----
 A C G T C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCATCTACCTTC
GYCATCMATCAT-
 C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCATCTACCTTC
ACCATCTGTT---
 C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCTACCTTC
GCNGCCATCTTG----
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GCCATCTACCTTC-
--------GCTTCC
 C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCATCTACCTTC
RGCCATYAATCA--
 A C G T C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCCATCTACCTTC
-NNACTTACCTN-
 C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCTACCTTC
GCCGCCATCTTG----
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A A C G T A G T C A G C T C G T A A G T C A G T C A C G T A C G T A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T