Information for 15-GCMSCKRSACKGG (Motif 24)

A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C A C T G A C G T A T C G A G C T G T A C A C T G A T C G A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.142e+01
Information Content per bp:1.831
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.8 +/- 27.7bp
Average Position of motif in Background61.2 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCMSCKRSACKGG
SNGCACCTGCHS---
 A C G T A C G T A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCMSCKRSACKGG
CGCACCTGCT----
 A C G T A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GCMSCKRSACKGG--
-----GACACGTGCC
 A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

HEY1/MA0823.1/Jaspar

Match Rank:4
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GCMSCKRSACKGG--
-----GGCACGTGTC
 A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

Npas2/MA0626.1/Jaspar

Match Rank:5
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GCMSCKRSACKGG--
-----NACACGTGCN
 A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

HES5/MA0821.1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCMSCKRSACKGG---
----CGGCACGTGCCA
 A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

Hes2/MA0616.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCMSCKRSACKGG-
-TAACGACACGTGC
 A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G A C G T
A C G T A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GCMSCKRSACKGG------
---CAATCACTGGCAGAAT
 A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCMSCKRSACKGG
AACACCTGCT----
 A C G T A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GCMSCKRSACKGG
----CCAGACAG-
 A C T G A G T C G T C A A T G C A G T C A C T G C T G A A T G C C G T A A G T C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T