Information for 10-GGAATATTGTACCGGA (Motif 19)

A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
Reverse Opposite:
G A C T A G T C A G T C C T A G A C T G A G C T C G T A A G T C C G T A T G C A A C G T C G T A A C G T A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.188e+01
Information Content per bp:1.915
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 14.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGAATATTGTACCGGA
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGAATATTGTACCGGA
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGAATATTGTACCGGA
TWGHWACAWTGTWDC---
 A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGAATATTGTACCGGA
YDGHTACAWTGTADC---
 A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAATATTGTACCGGA
AANTTATTGTTCTNNA
 A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGAATATTGTACCGGA
GGAAAAATTGTTAGGAA
 A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGAATATTGTACCGGA
--AAAATTGTTATGAA
 A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGAATATTGTACCGGA
CCWGGAATGY---------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGAATATTGTACCGGA
NTGGAATGTN--------
 A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGAATATTGTACCGGA
TGGAATGT---------
 A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C G T C T G A G T A C A G T C C T A G A C T G C T G A
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T