Information for 16-SWKRAGKMMACACACA (Motif 27)

A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A T C G C G A T A C T G A C G T C A T G A C G T T G C A A T G C A C G T A G T C G T A C C G A T A T G C
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.4 +/- 16.1bp
Average Position of motif in Background45.6 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SWKRAGKMMACACACA--
--AAAGTAAACAAAAATT
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:SWKRAGKMMACACACA-----
-----AGCGGCACACACGCAA
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SWKRAGKMMACACACA
--AAAGTAAACA----
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---SWKRAGKMMACACACA
NNNVCTGWGYAAACASN--
 A C G T A C G T A C G T A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:SWKRAGKMMACACACA
---AAGTAAACAAA--
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A
A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:SWKRAGKMMACACACA
CAAAAGTAAACAAAG-
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:SWKRAGKMMACACACA-
-----GGCCACACCCAN
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:SWKRAGKMMACACACA
--AAAGTAAACA----
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:SWKRAGKMMACACACA
------GCCACACCCA
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SWKRAGKMMACACACA
-----GGCCACACCCA
 A T C G C G T A C A T G C T A G C G T A A T C G A C G T G T C A G T A C C G T A A G T C C G T A A T G C G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A