Information for 5-AAGGCTTATG (Motif 25)

C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
Reverse Opposite:
A T G C C G T A C G A T C T G A C G T A C T A G A T G C A G T C A G C T A G C T
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.854
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif81.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets41.6 +/- 28.6bp
Average Position of motif in Background53.9 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGGCTTATG
NGGGATTA--
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTATG
-NGGATTAN-
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGCTTATG
VRGGATTARN
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTATG
-GGGATTANN
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTATG
-NGGATTAA-
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTATG
-GGGATTAA-
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGGCTTATG
--GGATTAGC
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCTTATG------
NNANTCTTATCTNNNNN
 A C G T C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTATG
-CGGATTAN-
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G
A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGGCTTATG--
--NCCTTATCTG
 C T G A C T G A A C T G A T C G A G T C A C G T A G C T G C T A A C G T T A C G A C G T A C G T
A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G