Information for 15-AGTTAGCTCCTCA (Motif 22)

C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G C G T A A C T G G T A C A C G T C G T A C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.4 +/- 30.8bp
Average Position of motif in Background47.6 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGTTAGCTCCTCA
-ATTAACACCT--
 C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AGTTAGCTCCTCA
ANNNCTAGTTAACNGNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGTTAGCTCCTCA
ACTAGTTAAC------
 A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAGCTCCTCA
NNNTTAGTTAACTNANN-
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAGCTCCTCA
NTTTTAGTTAACNNAGN-
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGTTAGCTCCTCA
--TTMACACCTT-
 C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGTTAGCTCCTCA---
-CTTATCTCHMCATCT
 C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

PH0154.1_Prrx1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGTTAGCTCCTCA
GTAACTAATTAACTACT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T A C G T A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGTTAGCTCCTCA
GTTAATTANCTCNN--
 A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGTTAGCTCCTCA
RGTTAGTGCCCY-
 C G T A C T A G A C G T A C G T C G T A A C T G A G T C C G A T A G T C G T A C A C G T A G T C C G T A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T