Information for 10-TTTGCAAGCAGGTATT (Motif 14)

A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
Reverse Opposite:
C G T A C G T A C G A T C T G A T A G C A G T C C A G T A C T G A T G C G A C T A C G T A C T G G T A C C G T A C T G A C G T A
p-value:1e-12
log p-value:-2.791e+01
Information Content per bp:1.722
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 21.9bp
Average Position of motif in Background59.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTTGCAAGCAGGTATT
TTCATTTGCATAT-------
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAAGCAGGTATT
ANATTTTTGCAANTN------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTGCAAGCAGGTATT
ATTTGCATAA-------
 A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTTGCAAGCAGGTATT
TTTGAAACCG------
 A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAAGCAGGTATT
TNTAATTTGCATACNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAAGCAGGTATT
TNTAATTTGCATACNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCAAGCAGGTATT
BTVATTWGCATA--------
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAAGCAGGTATT
TNTAATTTGCATANNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCAAGCAGGTATT
CTCATTTGCATW--------
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCAAGCAGGTATT
ATTTGCATAT-------
 A C G T A C G T A G C T A C G T A C T G G T A C C G T A C G T A T A C G T A G C G C T A C T A G A C T G A G C T G C T A A C G T C G A T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T