Information for 4-TCCACTGTTCTCA (Motif 5)

A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T C A A C T G G T C A C G T A A G T C C T G A A C T G A C G T A C T G A C T G C G T A
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.935
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 14.7bp
Average Position of motif in Background44.3 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCACTGTTCTCA
ATCCAC--------
 A C G T A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCCACTGTTCTCA
NCCATTGTTC---
 A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCACTGTTCTCA
-CCATTGTTYB--
 A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCCACTGTTCTCA-
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCACTGTTCTCA
-CCATTGTTC---
 A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCACTGTTCTCA
-CCATTGTTTT--
 A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCCACTGTTCTCA--
TTCAATTGTTCTAAAA
 A C G T A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCCACTGTTCTCA--
-TAATTGTTCTAAAC
 A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A A C G T A C G T
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCACTGTTCTCA----
CGAACAGTGCTCACTAT
 A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCCACTGTTCTCA
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A G C T C T A G A C G T A C G T G T A C A C G T A G T C C G T A
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T