Information for 1-CACAATGCAA (Motif 3)

G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A
Reverse Opposite:
A C G T C G A T A C T G T G A C G T C A A C G T G C A T A T C G A G C T A C T G
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.755
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif283.3
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets48.1 +/- 25.9bp
Average Position of motif in Background48.6 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CACAATGCAA--
TACCCACAATGCATTG
 A C G T A C G T A C G T A C G T G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CACAATGCAA----
--AGATGCAATCCC
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CACAATGCAA--
--ATATGCAAAT
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T A C G T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACAATGCAA-----
--ATATGCAAATNNN
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACAATGCAA--
--TTATGCAAAT
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T A C G T
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAATGCAA
-ACAAAG---
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACAATGCAA-
-MTGATGCAAT
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CACAATGCAA-----
---TATGCWAATBAV
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACAATGCAA------
TTGTATGCAAATTAGA
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CACAATGCAA----
---AAGGCAAGTGT
 G T A C T C G A T A G C C G T A G T C A C A G T A C T G G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T