p-value: | 1e-9 |
log p-value: | -2.181e+01 |
Information Content per bp: | 1.846 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 2.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 54.7 +/- 27.9bp |
Average Position of motif in Background | 26.9 +/- 18.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGTAAGTGTTGAG CAGGTAAGTAT---- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGTAAGTGTTGAG -TTAAGTGGN--- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGTAAGTGTTGAG -TTAAGTGGT--- |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGTAAGTGTTGAG- NTNNTTAAGTGGTTANN |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGTAAGTGTTGAG -TTAAGTGCTT-- |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGTAAGTGTTGAG AAGGCAAGTGT---- |
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MAFK/MA0496.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGTAAGTGTTGAG---- --AAANTGCTGACTNAG |
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ISL2/MA0914.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGTAAGTGTTGAG -TTAAGTGC---- |
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PB0117.1_Eomes_2/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTAAGTGTTGAG-- GCGGAGGTGTCGCCTC |
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Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGTAAGTGTTGAG--- ----GGTGYTGACAGS |
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