Information for 15-CATTTTCTGAGAR (Motif 23)

A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G
Reverse Opposite:
G A T C A C G T A G T C A G C T G A T C C G T A A C T G C T G A C G T A G T C A C G T A A C G T A C T G
p-value:1e-6
log p-value:-1.475e+01
Information Content per bp:1.834
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets56.8 +/- 18.0bp
Average Position of motif in Background48.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:CATTTTCTGAGAR--
---TTTCTNAGAAAN
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CATTTTCTGAGAR--
----TTCTTGGAAAN
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CATTTTCTGAGAR-
---CTTCTGGGAAA
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CATTTTCTGAGAR-
---TTTCCAGGAAA
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CATTTTCTGAGAR----
---TTTCCAGGAAATGG
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CATTTTCTGAGAR--
CATTTCCTGAGAAAT
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CATTTTCTGAGAR---
--ATTTCCNGGAAATN
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATTTTCTGAGAR----
-TCTTTCGAGGAATTTG
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CATTTTCTGAGAR
--TTTTATTRGN-
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CATTTTCTGAGAR--
---TTTCCNGGAAAN
 A G T C G T C A A C G T A C G T A C G T A G C T A G T C A C G T C A T G T C G A C T A G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C