Information for 13-CCCCCACGTGACC (Motif 16)

A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A G C T A G T C C G T A A T G C A C T G A C G T A C T G A C T G A T C G A T C G A C T G
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 30.5bp
Average Position of motif in Background26.3 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:forward strand
Alignment:CCCCCACGTGACC
--GCCACGTGACC
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:CCCCCACGTGACC
---TCACGTGACC
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

E-box(bHLH)/Promoter/Homer

Match Rank:3
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:CCCCCACGTGACC--
---TCACGTGACCGG
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CCCCCACGTGACC
--ACCACGTGAC-
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CCCCCACGTGACC
--KCCACGTGAC-
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CCCCCACGTGACC
---NCACGTGACN
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CCCCCACGTGACC
---NCACGTGACN
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CCCCCACGTGACC
--ATCACGTGAC-
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CCCCCACGTGACC
--GTCATGTGACC
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CCCCCACGTGACC
---CCACGTGGNN
 A G T C A T G C A T G C A G T C A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C