Information for 18-GGAACAAGATTACCAA (Motif 33)

A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C G T A C G T A G T C A G T C
p-value:1e-3
log p-value:-9.081e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 9.3bp
Average Position of motif in Background53.7 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAACAAGATTACCAA
-GCAAAACATTACTA-
 A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGAACAAGATTACCAA
--AAGAGGATTAG---
 A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGAACAAGATTACCAA
-----RGGATTAR---
 A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGAACAAGATTACCAA
TTAAGAACAATAAATT---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGAACAAGATTACCAA
NNAGGGACAAGGGCNC---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGAACAAGATTACCAA
GTAATCDGATTA----
 A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGAACAAGATTACCAA
-----NGGATTAA---
 A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGAACAAGATTACCAA
TGAACCCGATGACCC-
 A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GGAACAAGATTACCAA
------GGATTAGC--
 A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGAACAAGATTACCAA
----CAAGCTT-----
 A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T