Information for 15-AACAGAGCAGGGTGAT (Motif 23)

C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T
Reverse Opposite:
C T G A A C G T G T A C G T C A G T A C A G T C A T G C C G A T A C T G A G T C A G C T A G T C A C G T C T A G A G C T A C G T
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.753
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 16.9bp
Average Position of motif in Background53.0 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0107.1_Ascl2_2/Jaspar

Match Rank:1
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AACAGAGCAGGGTGAT
NATNGGGNGGGGANAN
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AACAGAGCAGGGTGAT--
---AGGNCANNGTGACCT
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AACAGAGCAGGGTGAT-
--NAGGTCACNNTGACC
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T A C G T
A C G T A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR1/MA0112.3/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AACAGAGCAGGGTGAT---
--CAGGTCACCGTGACCTT
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---AACAGAGCAGGGTGAT
GTAAACAG-----------
 A C G T A C G T A C G T C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AACAGAGCAGGGTGAT
--CACAGCAGGGGG--
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AACAGAGCAGGGTGAT
CACAGN----------
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:forward strand
Alignment:AACAGAGCAGGGTGAT---
---AGAGCGGGGTCAAGTA
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

SOX8/MA0868.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:AACAGAGCAGGGTGAT
AACACTGCACATTGTT
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PPARG/MA0066.1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:AACAGAGCAGGGTGAT----
AGTAGGTCACNGTGACCTAC
 C G T A C T G A A G T C C G T A A C T G C T G A T C A G G T A C C G T A A T C G C T A G A C T G A C G T C A T G C G T A A G C T A C G T A C G T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C