Information for 18-GCTTCTCTAGCCA (Motif 22)

A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G C T C G T A C T A G C G T A C T A G C G T A C G T A A C T G A G T C
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 31.2bp
Average Position of motif in Background44.3 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTTCTCTAGCCA
---CGTCTAGACA
 A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A
A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTTCTCTAGCCA
GCTTCC-------
 A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTTCTCTAGCCA
TCTTATCT-----
 A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCTTCTCTAGCCA----
-----ACTAGCCAATCA
 A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GCTTCTCTAGCCA-
--------TGCCAA
 A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCTTCTCTAGCCA
CCTTTTATAGNC-
 A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCTTCTCTAGCCA--
------CGTGCCAAG
 A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCTTCTCTAGCCA
CNNNGCTACTGTANNN-
 A C G T A C G T A C G T A C G T A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTTCTCTAGCCA
YCTTATCTBN---
 A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCTCTAGCCA
NCCTTATCTG----
 A C G T A C T G A G T C C G A T C G A T A G T C A C G T A G T C A C G T C T G A A C T G A G T C A G T C C G T A
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T