Information for 3-TWAMTGTRCAWTG (Motif 5)

A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G
Reverse Opposite:
A G T C C G T A G C T A A C G T C T A G A G T C C G T A A G T C C G T A A C G T A C G T C G A T G T C A
p-value:1e-13
log p-value:-3.132e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 25.0bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TWAMTGTRCAWTG--
----TGTGGATTNNN
 A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TWAMTGTRCAWTG-
--NNTGTGGATTSS
 A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TWAMTGTRCAWTG
-NATTGTGCAAT-
 A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TWAMTGTRCAWTG--
AACAATGTGCAGTGTT
 A C G T A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G A C G T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TWAMTGTRCAWTG------
--NNTNNACAATGGGANNN
 A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TWAMTGTRCAWTG-----
-NNNANTGCAGTGCNNTT
 A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TWAMTGTRCAWTG
---CTGTTCCTGG
 A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TWAMTGTRCAWTG----
NNNNTGAGCACTGTNNG
 A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TWAMTGTRCAWTG-
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

POU4F2/MA0683.1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TWAMTGTRCAWTG
CTCATTAATTATGCAT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T C A A C G T A C T G A C G T C T A G A G T C C G T A C G A T A C G T A C T G
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T A C G T A C G T