Information for 7-CMCGCACGGT (Motif 43)

A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T
Reverse Opposite:
G T C A A G T C A G T C A C T G A C G T A C T G A T G C A C T G A C T G A C T G
p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.865
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif37.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.9 +/- 23.0bp
Average Position of motif in Background41.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CMCGCACGGT
YCCGCCCACGCN
 A C G T A C G T A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CMCGCACGGT
CACGCA----
 A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CMCGCACGGT
TBGCACGCAA---
 A C G T A C G T A C G T A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CMCGCACGGT---
GGCACCCAGGGGTGC
 A C G T A C G T A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T A C G T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CMCGCACGGT
ACGCCCACGCA
 A C G T A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CMCGCACGGT
TACCCGCATN--
 A C G T A C G T A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CMCGCACGGT
CRCCCACGCA
 A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CMCGCACGGT--
AGACCCCCCACGAAGC
 A C G T A C G T A C G T A C G T A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T A C G T A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CMCGCACGGT
GGACCACCCACG--
 A C G T A C G T A C G T A C G T A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CMCGCACGGT-
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A G T C T G A C A G T C A T C G A G T C C G T A G T A C A C T G A C T G A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T