Information for 18-ATCGAGGCTCGCA (Motif 38)

C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T G C T C A G C T G A A C T G A G T C G T A C A C G T A T G C A T C G C T G A C G A T
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.0 +/- 23.5bp
Average Position of motif in Background45.0 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCGAGGCTCGCA----
-NGTAGGTTGGCATNNN
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATCGAGGCTCGCA-
-----GGTTGGCAT
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATCGAGGCTCGCA
--CTAGGCCT---
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ATCGAGGCTCGCA
-----NGCTN---
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ATCGAGGCTCGCA---
----TGTCTGDCACCT
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ATCGAGGCTCGCA
--CNAGGCCT---
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ATCGAGGCTCGCA-
----TBGCACGCAA
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ATCGAGGCTCGCA
-----GGCGCGCT
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:ATCGAGGCTCGCA---
---CTGTCTGTCACCT
 C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---ATCGAGGCTCGCA
TTGACCGAGAATTCC-
 A C G T A C G T A C G T C G T A A G C T A T G C A T C G C G T A A C T G A C T G A G T C A G C T A G T C A T C G A G T C C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T